Binder, Justo et al. (2013). Phylogenetic and phylogenomic overview of the the Polyporales. Mycologia (accepted)

Here we provide the fasta files containing the nucleotide and protein sequences for the 356 single-copy genes as recovered from the Mycocosm cluster number 1263 (no longer available).

Nucleotide data

Protein data

Datasets used in the phylogenetic study of Trametes

A. Justo & D.S. Hibbett. (2011). Phylogenetic classification of Trametes (Basidiomycota, Polyporales) based on a five-marker dataset. Taxon 60(6): 1567–1583.

All Nexus files are saved as plain text (.txt) and can be opened using MacClade (, Mesquite ( or any similar program

If you want to visualize the file just click on the link

If you want to save the file to your computer right click on the link and then use the “Save link as” option

nLSU + ITS dataset of Polyporales Polyporales_LSU_ITS

RPB1 dataset of Polyporales Polyporales_RPB1

RPB2 dataset of Polyporales Polyporales_RPB2

TEF1 dataset of Polyporales Polyporales_TEF1

nLSU + ITS + RPB1 + RPB2 +TEF1 dataset of Polyporales Polyporales_COMB

ITS dataset of Trametes Trametes_ITS

Additional datasets

RPB1 alignment including all intron regions RPB1_with_introns

RPB2 alignment including all intron regions RPB2_with_introns

TEF1 alignment including all intron regions TEF1_with_introns

ITS dataset of Coriolopsis sensu lato Coriolopsis_ITS

RPB1 dataset with amino acid data RPB1_AA

RPB2 dataset with amino acid data RPB2_AA

TEF1 dataset with amino acid data TEF1_AA